The simple nervous system and complete genomic sequence of
C. elegans has made it a powerful system for genome wide approaches
to behavior. Although there are only 32 chemosensory neurons of 14
types in C. elegans, preliminary results indicate that there are
~700 olfactory receptor genes, number resembling these for other
organisms including mouse, rat and human. More recently, sequencing
of an estimated 98% of the C. briggsae genome (manuscript in
preparation) provides an ideal platform for carrying out
comprehensive comparative genomic analysis between C. briggsae and
C. elegans genomes. In this study, we examined the olfactory
subgenomes of these two closely related organisms. A similar number
(~500) of olfactory genes have been identified for C. briggsae. Of
all these genes, there are >330 orthologs. C. elegans olfactory
subgenome has ~200 more genes than that of
C. briggsae. Interestingly, these "extra" genes all fall in to two
of a total six Pfam olfactory subfamilies, making the number of
genes for C. elegans in these two subfamilies twice that of
C. briggsae. The numbers for olfactory genes in the other four
subfamilies for both organisms, however, remain similar. Detailed
comparative analysis of chromosomal localization of these
orthologous and unique olfactory genes will help us understand the
dynamic nature of these genes and how these cousins adapt to their
own environment by evolving their own set of olfactory genes to
accommodate their abilities to feed, mate and communicate
efficiently.
Todd W. Harris, PhD
(harris@cshl.org)
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