The Generic Model Organism System Database Project (GMOD) seeks to
develop reuseable software components for model organism system
databases. In this paper we describe the Generic Genome Browser
(GBrowse), a web-based application for displaying genomic annotations
and other features. For the end user, features of the browser include
the ability to scroll and zoom through arbitrary regions of a genome,
to enter a region of the genome by searching for a landmark or
performing a full text search of all features, and the ability to
enable and disable tracks and change their relative order and
appearance. The user can upload private annotations in order to view
them in the context of the public ones, and publish those annotations
to the community. For the data provider, features of the browser
software include reliance on readily-available open source components,
simple installation, flexible configuration, and easy integration with
other components of a model organism system web site.|, qq|GBrowse is
freely available under an open source license. The software, its
documentation, and support are available at http://www.gmod.org.
Todd W. Harris, PhD
(harris@cshl.org)
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